{"id":26410,"date":"2025-01-14T17:49:49","date_gmt":"2025-01-14T16:49:49","guid":{"rendered":"https:\/\/montpellier-cancer.com\/?page_id=26410"},"modified":"2026-04-07T11:04:15","modified_gmt":"2026-04-07T10:04:15","slug":"atac-seq-technical-platform","status":"publish","type":"page","link":"https:\/\/montpellier-cancer.com\/en\/formations\/atac-seq-technical-platform\/","title":{"rendered":"ATAC-seq technical platform"},"content":{"rendered":"
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New experimental platform dedicated to epigenomic analysis based on ATAC-seq technology<\/h2>
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From January 2025, SIRIC Montpellier Cancer will launch a\u00a0new experimental platform dedicated to epigenomic analysis based on ATAC-seq technology.<\/strong>\u00a0This platform\u00a0will be available to all SIRIC teams<\/strong>\u00a0and will respond to specific needs to complete the characterisation of their\u00a0experimental\u00a0models and\u00a0patient-derived\u00a0biological collections.<\/p>\n<\/div>\n <\/div>\n <\/div>\n <\/div>\n\n\n

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How ATAC-seq platform works<\/h2>\n <\/div>\n \n
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Phase 1: Experimentation<\/div>\n −<\/span>\n +<\/span>\n <\/button>\n <\/h3>\n\n
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The experimental part will be supported by\u00a0the platform located\u00a0in Eric Soler\u2019s lab at the IGMM<\/a>.<\/p>\n

From January 2, 2025,\u00a0an engineer, No\u00e9mie Legoff, under the supervision of Charlotte Andrieu-Soler (CRCN-Inserm),\u00a0will generate the\u00a0ATAC-seq libraries from your samples (fresh or frozen).<\/p>\n

This phase 1 will be financially supported by SIRIC Montpellier Cancer.<\/strong><\/p>\n\n <\/div>\n <\/div>\n <\/div>\n

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Phase 2: Sequencing<\/div>\n −<\/span>\n +<\/span>\n <\/button>\n <\/h3>\n\n
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The sequencing of the libraries will be externalised but coordinated by the platform,\u00a0at the expense of the user team<\/strong><\/p>\n\n <\/div>\n <\/div>\n <\/div>\n

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Phase 3: Analysis<\/div>\n −<\/span>\n +<\/span>\n <\/button>\n <\/h3>\n\n
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The user team will conduct the data analysis after completing training on the ATAC-seq technology.<\/p>\n

A specialized training session will be offered by the bioinformatics cluster of SIRIC Montpellier Cancer in March 2025<\/strong> (details below).<\/em><\/p>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n\n <\/div>\n <\/div>\n <\/div>\n <\/div>\n <\/div>\n <\/div>\n\n\n\n

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ATAC-seq Platform Process Overview<\/figcaption><\/figure>\n\n\n
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ATAC-seq Training Course 2026 <\/h2>
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The SIRIC Montpellier Cancer and its Bioinformatics Cluster are organizing, on May 11, 12 and 13, 2026<\/strong>, the second edition of the training course \u201cUnlocking Epigenomic Insights: ATAC-seq Data Analysis in Practice.\u201d<\/strong><\/p>\n